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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8810983_8814609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8810983 - 8814609

Intron Length:

3627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TCTTGCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GCTCCTGTAACT

Flanking Amino Acid:

GLSIAQLIDVDEKNQMMTTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

69.8

34.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

81.3

0.7

0.9

77.9

35.2

Minor 5ss

35.5

-1.6

3.2

47.5

42.3

Minor BPS

55.2

0.24

2.1

73.8

43.1

Associated Gene:

Gene:

CHRNA4

Ensembl Gene ID:

ENSAPLG00000007776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008077

8809521 - 8829393

19873