Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_8811252_8988130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8811252 - 8988130

Intron Length:

176879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCACTGG

5'SS Class:

major

3'SS Sequence:

GCACTTGTACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAG

U12 Branch Point Sequence:

TTTTCCTTAGCC

Flanking Amino Acid:

KCSLSNKRNQQLHCSAVISP

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.1

50.2

43.3

Major BPS

54.9

0.12

1.6

53.6

43.8

Major PPT

62.5

0.28

1.1

54.4

44.5

Minor 5ss

36.1

-1.6

3.3

46.9

48.5

Minor BPS

82.8

1.01

1.4

90.7

29.9

Associated Gene:

Gene:

BIRC7

Ensembl Gene ID:

ENSAPLG00000006107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047375

8810311 - 8994470

184160