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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8823816_8829267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8823816 - 8829267

Intron Length:

5452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

TCTGTCTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TAAGCCTCAATA

Flanking Amino Acid:

HLRAEDADFSVKEDWKYVAM

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

71.9

39.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

75.2

0.57

41.9

Minor 5ss

36.1

-1.6

2.9

48.1

41.6

Minor BPS

58.4

0.26

1.6

65.89

40.5

Associated Gene:

Gene:

CHRNA4

Ensembl Gene ID:

ENSAPLG00000007776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008077

8809521 - 8829393

19873