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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8850171_8851874_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8850171 - 8851874

Intron Length:

1704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCA

5'SS Class:

major

3'SS Sequence:

TGTCTCGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACTGCTTTAAGG

Flanking Amino Acid:

FRDTQLTQRTSDVHLFAIPP

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

64.8

35.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.2

0.68

0.9

37.2

Minor 5ss

23.9

-3

3.3

29.9

43.2

Minor BPS

53.1

-0

1.8

56.74

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073

ENSAPLT00000007496

8836190 - 8876046

39857