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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8852014_8853666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8852014 - 8853666

Intron Length:

1653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AACCACTTAATT

Flanking Amino Acid:

TISSAAGSIRGFDMMEVFGL

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

66.1

45.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

79.6

0.67

0.8

72.3

37.7

Minor 5ss

38.6

-1.3

3.4

56.3

47.9

Minor BPS

60.1

0.39

1.5

70.37

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073

ENSAPLT00000007496

8836190 - 8876046

39857