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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8857840_8860461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8857840 - 8860461

Intron Length:

2622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

ATCCCTGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCACCTTTAATC

Flanking Amino Acid:

SDTVSIQHRTNSRSPPTNLF

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

34.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

62.5

0.28

56.3

38.2

Minor 5ss

36.5

-1.5

3.4

54.7

43.6

Minor BPS

67.8

0.54

1.2

68.35

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073