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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8864705_8865225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8864705 - 8865225

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAGGTCGT

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GCACACTGAAGC

Flanking Amino Acid:

GDGLRGVTSTLPLSSPRSLR

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.4

63.6

48.1

Major BPS

0.3

34.1

Major PPT

80.7

0.69

0.7

73.2

31.8

Minor 5ss

35.9

-1.6

3.3

48.5

41.1

Minor BPS

43.5

-0.5

1.8

47.78

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073

ENSAPLT00000007496

8836190 - 8876046

39857