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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8865356_8866115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8865356 - 8866115

Intron Length:

760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTGTCCTGACAG

Flanking Amino Acid:

YPSKGGTPKEVILNGAVSSL

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

84.4

0.77

0.9

81.2

36.5

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

47.3

-0.3

1.9

53.26

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073

ENSAPLT00000007496

8836190 - 8876046

39857