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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8871201_8871393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8871201 - 8871393

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGGAGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

PPPNAVLVQPAKDKAEKKRQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

61.8

0.27

1.1

54.4

44.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073