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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8871906_8873517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8871906 - 8873517

Intron Length:

1612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CATCCCACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

AATTTCTGAGCT

Flanking Amino Acid:

GYKVRVKPMAGDSEQEVMLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.6

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

67.2

0.39

0.9

62.9

32.5

Minor 5ss

39.1

-1.2

49.9

46.5

Minor BPS

58.9

0.36

1.7

76.61

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038376

8845088 - 8873908

28821

ENSAPLT00000037361

8845088 - 8876160

31073

ENSAPLT00000007496

8836190 - 8876046

39857