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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8887242_8888419_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8887242 - 8888419

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGCGTGAG

5'SS Class:

major

3'SS Sequence:

CCACCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAC

U12 Branch Point Sequence:

CTTGTCCCACCT

Flanking Amino Acid:

VFVRGQSLYEKLVGAEGSIL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

62.3

38.4

Major BPS

49.2

-0

1.3

53.6

41.6

Major PPT

64.6

0.33

57.2

38.4

Minor 5ss

27.2

-2.6

3.2

30.5

37.2

Minor BPS

42.9

-0.4

2.1

63.92

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039996

8882101 - 8891076

8976

ENSAPLT00000032228

8882252 - 8891076

8825

ENSAPLT00000007265

8882101 - 8897568

15468