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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8888544_8890724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8888544 - 8890724

Intron Length:

2181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

CTCCTCCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCACAA

U12 Branch Point Sequence:

CAACGCTCACCT

Flanking Amino Acid:

KLMDHYIIHHVCDEHSDYKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

54.4

44.7

Major BPS

55.9

0.15

63.2

34.1

Major PPT

81.4

0.71

0.7

72.6

32.1

Minor 5ss

25.7

-2.8

3.2

30.9

43.1

Minor BPS

41.9

-0.5

2.1

55.78

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032228

8882252 - 8891076

8825

ENSAPLT00000007265

8882101 - 8897568

15468

ENSAPLT00000039996

8882101 - 8891076

8976