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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8910476_8913726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8910476 - 8913726

Intron Length:

3251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTAGGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

TCCTCTCTAGGT

Flanking Amino Acid:

ENVLKPAQEKGVGSKGWRDV

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

0.49

69.3

40.8

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

45.3

-0.2

2.1

63.76

46.8

Associated Gene:

Gene:

ARFGAP1

Ensembl Gene ID:

ENSAPLG00000006416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006674

8909605 - 8927865

18261