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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8911709_8913726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8911709 - 8913726

Intron Length:

2018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGATTCGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTTTATGACT

Flanking Amino Acid:

ENVLKPAQEKVKEGKIFEEV

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

80.7

34.7

Major BPS

0.85

0.9

39.9

Major PPT

70.6

0.46

66.3

40.6

Minor 5ss

43.9

-0.7

2.8

58.4

46.2

Minor BPS

61.1

0.43

1.6

80.24

35.4

Associated Gene:

Gene:

ARFGAP1

Ensembl Gene ID:

ENSAPLG00000006416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032803

8909162 - 8927865

18704

ENSAPLT00000031804

8907979 - 8927865

19887