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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8911709_8916971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8911709 - 8916971

Intron Length:

5263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGATTCGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTTTATGACT

Flanking Amino Acid:

TRFGSQASQKVKEGKIFEEV

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

85.1

25.9

Major BPS

0.85

0.9

39.9

Major PPT

70.6

0.46

66.3

40.6

Minor 5ss

33.9

-1.8

2.8

42.4

44.3

Minor BPS

61.1

0.43

1.6

80.24

35.4

Associated Gene:

Gene:

ARFGAP1

Ensembl Gene ID:

ENSAPLG00000006416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029120

8909162 - 8927865

18704