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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8915651_8916971_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8915651 - 8916971

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTATA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGGGTAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCTAC

U12 Branch Point Sequence:

GTCTGGGTAAAG

Flanking Amino Acid:

TRFGSQASQKFWGYKQQPEP

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

85.1

25.9

Major BPS

51.6

0.04

1.3

53.8

41.6

Major PPT

55.8

0.13

1.2

Minor 5ss

33.9

-1.8

2.8

42.4

44.3

Minor BPS

-1.2

2.7

44.63

47.2

Associated Gene:

Gene:

ARFGAP1

Ensembl Gene ID:

ENSAPLG00000006416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031804

8907979 - 8927865

19887

ENSAPLT00000006674

8909605 - 8927865

18261