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Intron Name: Anas_platyrhynchos_platyrhynchos_21_893345_894488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

893345 - 894488

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GTCACTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TACTGCCTAACT

Flanking Amino Acid:

APPYVHAVGRGSEAAAVGLH

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

79.8

0.67

0.9

76.5

37.4

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

56.6

0.28

2.1

77.88

44.1

Associated Gene:

Gene:

PREX1

Ensembl Gene ID:

ENSAPLG00000010034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046636

744231 - 918369

174139

ENSAPLT00000027144

744231 - 918369

174139

ENSAPLT00000010521

815464 - 918244

102781