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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8937911_8960864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8937911 - 8960864

Intron Length:

22954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GAGGCTGTAACT

Flanking Amino Acid:

TLIFLCALQLLAALERQVFD

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

62.2

0.3

1.2

38.7

Major PPT

88.1

0.86

0.7

80.5

31.5

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

48.6

-0

2.1

65.28

45.4

Associated Gene:

Gene:

NKAIN4

Ensembl Gene ID:

ENSAPLG00000006143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045784

8937299 - 8983490

46192

ENSAPLT00000021320

8937299 - 8984788

47490

ENSAPLT00000006384

8937299 - 8983024

45726