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Intron Name: Anas_platyrhynchos_platyrhynchos_21_8988188_8990259_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8988188 - 8990259

Intron Length:
2072

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGTGCT

5'SS Class:
major

3'SS Sequence:
CCTGGTTATACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AGCATTTTAATG

Flanking Amino Acid:
QTEQDSSASQDAETSRSREE

Intron Amino Acid Position:
283

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1.2
70.9
39.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
71.2
0.48
1
64.3
40.7

Minor 5ss
30.3
-2.3
3.3
42
44.7

Minor BPS
52
-0
1.4
50.27
38.5

Associated Gene:

Gene:
BIRC7

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8987339 - 8994470
7132