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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9005417_9005734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9005417 - 9005734

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TCTTCTTTACTC

Flanking Amino Acid:

MSATSVDPQRPKGQDNKVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

0.6

65.6

41.1

Major PPT

76.7

0.6

69.4

41.7

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

66.5

0.5

1.6

73.34

38.7

Associated Gene:

Gene:

YTHDF1

Ensembl Gene ID:

ENSAPLG00000005985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028746

9005390 - 9012986

7597

ENSAPLT00000006221

9005390 - 9018219

12830