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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9007183_9011411_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9007183 - 9011411

Intron Length:

4229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TTTCCTTTAACA

Flanking Amino Acid:

EPYLSGQSNQNSSYPSMTDP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

1.1

82.6

29.8

Major BPS

79.2

0.72

Major PPT

0.76

0.8

80.8

29.7

Minor 5ss

32.6

-2

3.1

41.2

45.2

Minor BPS

84.5

1.08

88.93

Associated Gene:

Gene:

YTHDF1

Ensembl Gene ID:

ENSAPLG00000005985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028746

9005390 - 9012986

7597

ENSAPLT00000019557

9005390 - 9012986

7597

ENSAPLT00000006221

9005390 - 9018219

12830