Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_91359_92077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91359 - 92077

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCATGTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTGCATTATTT

Flanking Amino Acid:

FRFIGRFIAMALFHGKFIDT

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

100

1.24

0.5

100

Major PPT

79.9

0.67

0.9

77.1

36.9

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

57.7

0.32

80.9

41.2

Associated Gene:

Gene:

ITCH

Ensembl Gene ID:

ENSAPLG00000013320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035242

70810 - 99225

28416

ENSAPLT00000013953

70810 - 99225

28416