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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9310585_9311320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9310585 - 9311320

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

TCCTTTGTACGT

Flanking Amino Acid:

CTCKYLLTEKELTIPIEYLT

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

36.3

Major BPS

61.6

0.29

1.4

63.4

Major PPT

82.7

0.74

0.7

77.1

24.9

Minor 5ss

39.9

-1.1

2.8

50.4

Minor BPS

40.8

-0.6

2.3

57.56

46.4

Associated Gene:

Gene:

SLC17A9

Ensembl Gene ID:

ENSAPLG00000005312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048086

9303981 - 9322271

18291

ENSAPLT00000005498

9303981 - 9322271

18291