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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9311452_9312195_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9311452 - 9312195

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACCCAA

U12 Branch Point Sequence:

CTTGGCAGACCC

Flanking Amino Acid:

YSTVGTGSQFGTLVIGGAGS

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.7

33.5

Major BPS

45.1

-0.3

1.3

50.4

36.7

Major PPT

79.3

0.66

0.8

69.6

36.7

Minor 5ss

-1.1

2.7

42.4

44.3

Minor BPS

38.5

-0.8

2.2

51.55

45.4

Associated Gene:

Gene:

SLC17A9

Ensembl Gene ID:

ENSAPLG00000005312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005498

9303981 - 9322271

18291

ENSAPLT00000048086

9303981 - 9322271

18291