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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9337010_9338279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9337010 - 9338279

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

0.9

38.1

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

63.6

0.29

1.3

63.75

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038171

9336911 - 9361159

24249