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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9353033_9355474_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9353033 - 9355474

Intron Length:

2442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTTTTGAAAC

Flanking Amino Acid:

ETVQTSNAVSAFQGGESGVC

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.77

0.8

81.3

36.4

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

58.3

0.24

1.5

67.73

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033380

9338593 - 9361159

22567

ENSAPLT00000038171

9336911 - 9361159

24249