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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9356787_9357093_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9356787 - 9357093

Intron Length:

307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAAG

5'SS Class:

major

3'SS Sequence:

TGGTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATTTCCTTATGT

Flanking Amino Acid:

YCICRQPHNNRFMICCDRCE

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

68.8

43.8

Major BPS

75.9

0.64

66.1

40.5

Major PPT

83.6

0.76

0.9

36.6

Minor 5ss

37.3

-1.4

3.1

47.3

48.3

Minor BPS

67.8

0.64

1.9

86.33

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033380

9338593 - 9361159

22567

ENSAPLT00000038171

9336911 - 9361159

24249