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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9430501_9430908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9430501 - 9430908

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTGTTAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCTGTTAATT

Flanking Amino Acid:

PGITGKPGPPGKEASEQHIR

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.61

0.9

70.6

38.9

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

56.4

0.28

2.1

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003425

9426876 - 9462351

35476