Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_9449582_9450113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9449582 - 9450113

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTCTGTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAG

U12 Branch Point Sequence:

CTCTGTTCAACA

Flanking Amino Acid:

QAGKGLPGPPGPPGPSGLPG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

47.1

-0.1

1.7

55.4

48.1

Major PPT

73.6

0.53

0.9

35.9

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

49.5

-0

62.68

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003425

9426876 - 9462351

35476