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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9456183_9456670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9456183 - 9456670

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTTTTCTGATTC

Flanking Amino Acid:

PGPPGLPGPPGPKGAPGKPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.7

0.74

0.9

81.5

35.2

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

0.14

1.7

67.58

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003425

9426876 - 9462351

35476