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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9456707_9460292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9456707 - 9460292

Intron Length:

3586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TCATTGCTAACA

Flanking Amino Acid:

PGPSGKDGIDGEPGPPGLPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.8

30.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

79.9

0.67

0.8

80.2

31.9

Minor 5ss

34.2

-1.8

3.4

41.4

Minor BPS

47.8

-0.1

2.3

64.21

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003425

9426876 - 9462351

35476