Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_9479041_9479509_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9479041 - 9479509

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

AACTCTCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAC

U12 Branch Point Sequence:

GTAGCATTAACT

Flanking Amino Acid:

FHAMLGHKPVGVNRHFHMIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

69.5

0.49

71.3

30.3

Major PPT

0.36

0.9

62.8

37.7

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

64.4

0.53

1.7

79.24

42.2

Associated Gene:

Gene:

MRGBP

Ensembl Gene ID:

ENSAPLG00000029735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034161

9475712 - 9479756

4045