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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9610959_9611597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9610959 - 9611597

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCGGTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CAGGGAGTAATG

Flanking Amino Acid:

YTLITGLVYKVLGTTFFMVA

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

72.3

0.5

65.3

41.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

33.8

-1.3

2.3

32.55

41.3

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003478

9610806 - 9625849

15044

ENSAPLT00000041426

9609806 - 9622459

12654