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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9611747_9612300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9611747 - 9612300

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATAGTAC

5'SS Class:

major

3'SS Sequence:

TGTCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCTGCCCTAACT

Flanking Amino Acid:

GIQWIVVRTLGSIPGPIAFG

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

65.1

35.3

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

78.7

0.65

0.8

73.5

31.5

Minor 5ss

42.5

-0.8

3.2

57.8

47.2

Minor BPS

60.5

0.41

1.9

76.24

46.2

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044