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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9612366_9612671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9612366 - 9612671

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CGCTGCTGAACA

Flanking Amino Acid:

SSIPALTATLRCVPDRQRSF

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.9

39.6

Major BPS

0.42

1.1

57.3

41.7

Major PPT

83.7

0.76

0.7

76.8

31.9

Minor 5ss

40.1

-1.1

2.8

45.2

Minor BPS

-0

60.68

45.1

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044