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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9612839_9613469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9612839 - 9613469

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TAGCAAACAACT

Flanking Amino Acid:

VSEKLRNGKKVYEECSCIEK

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

71.5

38.6

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

80.3

0.68

0.8

73.8

36.2

Minor 5ss

41.6

-0.9

2.7

43.2

Minor BPS

40.5

-0.6

59.08

42.8

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044