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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9613636_9614215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9613636 - 9614215

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAACG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAG

U12 Branch Point Sequence:

TCCCCACTGACT

Flanking Amino Acid:

MAGVTHSYTGSVLPGDKVNL

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

Major BPS

55.9

0.15

1.5

39.8

Major PPT

76.7

0.6

0.8

74.6

36.4

Minor 5ss

33.9

-1.8

2.8

41.7

44.4

Minor BPS

47.5

-0.1

66.91

43.5

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044