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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9619478_9620303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9619478 - 9620303

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTGTGTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTGT

U12 Branch Point Sequence:

TGTGTCTTACAG

Flanking Amino Acid:

FLNIYTEIHREPDITPENTL

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

72.5

39.9

Major BPS

28.3

-1.3

4.2

57.4

49.1

Major PPT

82.8

0.74

0.9

76.5

37.7

Minor 5ss

43.2

-0.7

2.8

54.8

43.5

Minor BPS

48.6

-0.2

1.9

56.62

44.8

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044