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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9620395_9621527_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9620395 - 9621527

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GGTTCTCTAACA

Flanking Amino Acid:

VKTNYSPVYIAVFYTAAILG

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

72.3

0.55

73.3

28.9

Major PPT

91.3

0.93

0.6

89.3

19.5

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

64.7

0.46

1.7

73.92

37.3

Associated Gene:

Gene:

SLCO4A1

Ensembl Gene ID:

ENSAPLG00000003398

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041426

9609806 - 9622459

12654

ENSAPLT00000003478

9610806 - 9625849

15044