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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9807927_9810215_F

Intron Information:

Intron Rank:

128272

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9807927 - 9810215

Intron Length:

2289

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

ATG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCTGCACGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGTAT

U12 Branch Point Sequence:

CAGGCTGTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

46.5

-0.2

1.5

45.3

47.5

Major PPT

38.4

-0.6

3.1

51.6

36.9

Minor 5ss

44.9

-0.6

3.2

63.2

43.8

Minor BPS

42.2

-0.5

2.2

55.87

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037956

9807716 - 9825466

17751