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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9819383_9824173_F

Intron Information:

Intron Rank:

128277

Intron Class:

major

Intron Phase:

Intron Coordinates:

9819383 - 9824173

Intron Length:

4791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

GGTCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CTTCACATAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.54

0.9

66.4

35.7

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

51.6

0.03

1.8

65.97

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045254

9807716 - 9825466

17751