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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9851628_9858552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9851628 - 9858552

Intron Length:

6925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

64.8

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.76

0.8

77.4

36.9

Minor 5ss

33.5

-1.9

2.7

44.8

42.5

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780