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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9862631_9862792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9862631 - 9862792

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTTATG

Flanking Amino Acid:

HDVPGLELGEEKPAGQRSSP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.8

0.94

0.7

89.1

26.6

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

55.9

0.04

1.7

61.8

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780