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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9862876_9864135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9862876 - 9864135

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAA

U12 Branch Point Sequence:

TGCCGCTGAACC

Flanking Amino Acid:

VLQEASLAEMASQRISNQLH

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.6

30.3

Major BPS

54.6

0.12

1.1

46.7

38.9

Major PPT

71.7

0.49

0.8

65.2

30.5

Minor 5ss

27.7

-2.6

31.2

36.9

Minor BPS

49.5

-0

1.9

61.68

43.2

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780