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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9865649_9865985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9865649 - 9865985

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

CTGCCCTTTACA

Flanking Amino Acid:

EEEEQEEEAMLALSRTHPTS

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

76.3

0.65

67.3

39.3

Major PPT

78.6

0.64

0.8

71.8

32.7

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

0.37

1.7

68.86

43.2

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780