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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9866095_9867543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9866095 - 9867543

Intron Length:

1449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CATGTCTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTCCTTTCATG

Flanking Amino Acid:

LAASAHTGEPDDDDAESGQQ

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.5

0.9

64.9

36.1

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

52.1

-0

1.8

59.98

42.8

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780