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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9868064_9868992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9868064 - 9868992

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATTAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

CTATCATTATCT

Flanking Amino Acid:

RKRGQDPWTKGSKKSMRGRK

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

74.7

0.56

70.8

38.8

Minor 5ss

30.2

-2.3

3.3

39.5

46.1

Minor BPS

59.5

0.38

1.9

78.16

43.7

Associated Gene:

Gene:

RBBP8NL

Ensembl Gene ID:

ENSAPLG00000015008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015630

9851394 - 9870173

18780