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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9985904_9987167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9985904 - 9987167

Intron Length:

1264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACAGCAC

U12 Branch Point Sequence:

CCGACAGCACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

78.2

36.3

Major BPS

42.9

-0.4

1.3

45.4

37.1

Major PPT

77.2

0.61

0.8

70.2

30.7

Minor 5ss

43.7

-0.7

2.9

59.5

38.8

Minor BPS

28.9

-1.7

24.49

36.3

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828