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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9987309_9987698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9987309 - 9987698

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TGTTGCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

GCTTAATTAACT

Flanking Amino Acid:

APGHYGPSCQPCQCSGPGQY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

62.8

38.2

Major BPS

67.7

0.44

58.3

38.4

Major PPT

82.5

0.73

0.9

73.4

41.9

Minor 5ss

28.5

-2.5

3.1

29.9

36.2

Minor BPS

62.7

0.48

1.8

79.32

42.1

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828