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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9987837_9988261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9987837 - 9988261

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGACAT

U12 Branch Point Sequence:

ACTCCCAGAGCA

Flanking Amino Acid:

PGYFNYPLCQLCGCSAVGTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.3

72.2

39.5

Major BPS

-0

1.2

56.4

39.5

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

35.8

-1.6

2.8

41.3

38.3

Minor BPS

45.2

-0.3

1.9

57.72

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920